PROTTEST is a lightweight yet reliable utility that allows you to easily and quickly choose the model of protein evolution that will best suit your needs. The program includes several substitution matrices that serve as models, such as LG, WAG, Dayhoff, mtREV, JTT, DCMut, Blosum62, VT, RtREV, CpREV, MtArt, MtMam, HIVw, Hivb, and many others. These models wil let you see the relative rates of amino-acid replacement. Specific improvements will be indicated, as well. The program will help you consider the evolutionary constraints dictated by preserving of protein function and structure.
ProtTest utilizes various statistics (BIC, AICc) along with AIC (Akaike Information Criterion) to discover which potential models will best fit the available data.
Pros
- Several substitution matrices are included.
- Various statistics are used to determine the right models.
| Name | ProtTest |
|---|---|
| Version | 3.4 |
| Developer | The University of Vigo | see all products from this developer |
| Product Homepage | ProtTest |
| License | Free (Freeware) |
| Last Week Downloads | 4 |
| All Time Downloads | 1,120 |
| Filename | prottest-3.4-20140123.tar.gz |
| Filesize | 6.7MB |
| MD5 Checksum | 8108EF91F2777B488FFEB47BE27572DC |
| OS Support | Windows All |
| Category | Home & Education |
100% CLEAN Certification
ProtTest has been tested by Download82.com team against viruses, spyware, adware, trojan, backdoors and was found to be 100% clean. Our editors will recheck this software periodically to assure that it remains clean.
Comments
Old Versions
| Software | Date Added |
|---|---|
| ProtTest 3.4 | September 26, 2019 - Latest Version |
| ProtTest 2.4 | August 02, 2010 |